Orthologous Analysis

Step 1. Input Transcript ID of Rice (RAP-DB) or Maize (MaizeSequence.org) or Sorghum (JGI).

example ID). Rice: Os06t0133000-01 Maize: GRMZM2G044744_T01 Sorghum: Sb01g021190.1

Step 2. Confirm Orthologous Transcript ID.


  Transcript ID RefSeq Protein ID RefSeq Definition


  Transcript ID RefSeq Protein ID RefSeq Definition


  Transcript ID RefSeq Protein ID RefSeq Definition

Step 3. Select Strains.

Total limit : 50 strains


SRA sample ID species subspecies strain ID
DRS000010 Oryza sativa Japonica Koshihikari
DRS000412 Oryza sativa Japonica Omachi
DRS003820 Oryza sativa Japonica Hitomebore
ERS005965 Oryza sativa Indica Xiaohongjiaoxuan HP539
ERS005966 Oryza sativa Indica Changjingchi HP524
ERS005967 Oryza sativa Indica Fengxiangzao HP435
ERS005968 Oryza sativa Japonica Dachangmanghandao HP241
ERS005969 Oryza sativa Indica Yihongzui HP317
ERS005970 Oryza sativa Indica Xiaohonggu HP248
ERS005971 Oryza sativa Youmanghandao HP27
ERS005972 Oryza sativa Indica Jiuyuenuogu HP289
ERS005973 Oryza sativa Japonica Lengshuidao HP78
ERS005974 Oryza sativa Indica Xiangzhou-4 HP483
ERS005975 Oryza sativa Japonica Hangu-5 HP308
ERS005976 Oryza sativa Indica Aigansazhima HP407
ERS005977 Oryza sativa Japonica Longyangnuo HP275
ERS005978 Oryza sativa Japonica Huludao HP382
ERS005979 Oryza sativa Japonica Yezhuwan HP2
ERS005980 Oryza sativa Indica Makeai HP473
ERS005981 Oryza sativa Indica Xuxumagu HP409
ERS005982 Oryza sativa Indica Xintangerpozao-2 HP472
ERS005983 Oryza sativa Indica Bayuehzhong HP557
ERS005984 Oryza sativa Japonica Xianggu HP62
ERS005985 Oryza sativa Indica Xiaojiugu HP307
ERS005986 Oryza sativa Japonica Huangsinuo HP421
ERS005987 Oryza sativa Indica Liutiaozi HP440
ERS005988 Oryza sativa Indica Zaodaxian HP226
ERS005989 Oryza sativa Japonica Handaozi HP19
ERS005990 Oryza sativa Japonica Qiaonong-1 HP512
ERS005991 Oryza sativa Japonica Dongying-8 HP390
ERS005992 Oryza sativa Xiangmi HP345
ERS005993 Oryza sativa Indica Makedao HP461
ERS005994 Oryza sativa Indica Ximazagu HP528
ERS005995 Oryza sativa Japonica Gaoganbai HP85
ERS005996 Oryza sativa Indica Wanyedao HP463
ERS005997 Oryza sativa Indica Qianjinzao HP478
ERS005998 Oryza sativa Indica Baihonggu HP359
ERS005999 Oryza sativa Japonica Chuanbaizao HP283
ERS006000 Oryza sativa Indica Maoxiangzhan HP489
ERS006001 Oryza sativa Indica Yanshuichi HP240
ERS006002 Oryza sativa Indica Xianshuichi HP216
ERS006003 Oryza sativa Indica Hongbaizhanhangu HP328
ERS006004 Oryza sativa Japonica Heinuomi HP404
ERS006005 Oryza sativa Indica Jinbaoyin HP600
ERS006006 Oryza sativa Baijingzhan HP47
ERS006007 Oryza sativa Indica Pingnanbai HP211
ERS006008 Oryza sativa Indica Tonghezao HP443
ERS006009 Oryza sativa Indica Hongjiaowen HP260
ERS006010 Oryza sativa Indica Wangjiaxiangxiaohuangzhan HP313
ERS006011 Oryza sativa Indica Nuodao HP601
ERS006012 Oryza sativa Japonica Luweidao HP21
ERS006013 Oryza sativa Japonica Honggeda(Houbeiwa) HP50
ERS006014 Oryza sativa Indica Hebaogu HP408
ERS006015 Oryza sativa Indica Tongzinuo HP245
ERS006016 Oryza sativa Indica Sanshizi HP465
ERS006017 Oryza sativa Indica Xiaoshaogu HP265
ERS006018 Oryza sativa Indica Guazizhan HP537
ERS006019 Oryza sativa Indica Liushizao HP453
ERS006020 Oryza sativa Indica Datiezao HP239
ERS006021 Oryza sativa Japonica Baiguonuo-1 HP65
ERS006022 Oryza sativa Indica Lengshuizi(Yehe) HP555
ERS006023 Oryza sativa Indica Shuibaizhan HP399
ERS006024 Oryza sativa Japonica Dandongludao HP18
ERS006025 Oryza sativa Japonica Heinuo HP596
ERS006026 Oryza sativa Indica Dazhangu HP413
ERS006027 Oryza sativa Indica Qiwei HP347
ERS006028 Oryza sativa Indica Banbiannuo-2 HP447
ERS006029 Oryza sativa Indica Baiduluo HP562
ERS006030 Oryza sativa Indica Baihuazhan HP346
ERS006031 Oryza sativa Indica Luotianzaonuo HP244
ERS006032 Oryza sativa Indica Qizhan HP344
ERS006033 Oryza sativa Indica Xiangzhan-1 HP288
ERS006034 Oryza sativa Japonica Gaoliangdao HP33
ERS006035 Oryza sativa Indica Fennuo HP273
ERS006036 Oryza sativa Indica Nandazhan HP428
ERS006037 Oryza sativa Japonica Mifengdao HP256
ERS006038 Oryza sativa Indica Heiqunzhan HP451
ERS006039 Oryza sativa Indica Jizhuaxian HP386
ERS006040 Oryza sativa Indica Haoganduo HP355
ERS006041 Oryza sativa Indica Huanggu HP419
ERS006042 Oryza sativa Indica Damake HP470
ERS006043 Oryza sativa Indica Xiaohongzhan HP581
ERS006044 Oryza sativa Indica Jiangxinuo HP496
ERS006045 Oryza sativa Indica Zaonuo-1 HP500
ERS006046 Oryza sativa Indica Erfuzao HP335
ERS006047 Oryza sativa Indica Liuyuegu HP338
ERS006048 Oryza sativa Indica Jinuo HP566
ERS006049 Oryza sativa Indica Xuelihongfandao HP368
ERS006050 Oryza sativa Indica Dishuigu HP517
ERS006051 Oryza sativa Japonica Xiaozhanjiangmidao HP57
ERS006052 Oryza sativa Indica Erdonghe-1 HP206
ERS006053 Oryza sativa Indica Honggu-2 HP182
ERS006054 Oryza sativa Xiaozhong HP464
ERS006055 Oryza sativa Japonica Wenziju HP79
ERS006056 Oryza sativa Indica Yintiaoxian HP326
ERS006057 Oryza sativa Indica Handao HP243
ERS006058 Oryza sativa Indica Mazimang HP207
ERS006059 Oryza sativa Japonica Dadongnuo HP1
ERS006060 Oryza sativa Japonica Leinuo HP82
ERS006061 Oryza sativa Indica Taidongwuzhan HP225
ERS006062 Oryza sativa Indica Gouyingdu HP299
ERS006063 Oryza sativa Indica Baiyinqiu HP181
ERS006064 Oryza sativa Indica Mazinuo HP203
ERS006065 Oryza sativa Indica Tazhan HP400
ERS006066 Oryza sativa Japonica Nongken-58 HP996
ERS006067 Oryza sativa Indica Tuanguzao HP334
ERS006068 Oryza sativa Indica Handao HP192
ERS006069 Oryza sativa Laolaihong HP294
ERS006070 Oryza sativa Indica Yelicang HP253
ERS006071 Oryza sativa Indica Zhuxizao HP450
ERS006072 Oryza sativa Indica Shuihongmi HP541
ERS006073 Oryza sativa Japonica Sanyuandao HP370
ERS006074 Oryza sativa Japonica ronghe-3 HP599
ERS006075 Oryza sativa Indica Datiegan HP536
ERS006076 Oryza sativa Japonica Bowangnuo HP46
ERS006077 Oryza sativa Indica Jianongxianyu-36 HP227
ERS006078 Oryza sativa Indica Hanzhangu HP304
ERS006079 Oryza sativa Indica Hanhe-2 HP276
ERS006080 Oryza sativa Indica Yunnanbai HP374
ERS006081 Oryza sativa Indica Yizhixiang HP523
ERS006082 Oryza sativa Indica Changruangu HP264
ERS006083 Oryza sativa Indica Xiangdao HP329
ERS006084 Oryza sativa Japonica Jinguzi HP376
ERS006085 Oryza sativa Japonica Liaoyang-5 HP77
ERS006086 Oryza sativa Indica Hainandao HP484
ERS006087 Oryza sativa Indica Caomaodan HP259
ERS006088 Oryza sativa Indica Magu-3 HP397
ERS006089 Oryza sativa Japonica Feidongtangdao HP30
ERS006090 Oryza sativa Indica Baimaguzi HP377
ERS006091 Oryza sativa Indica Guanghongba HP611
ERS006092 Oryza sativa Indica Hanzhonghongdao HP364
ERS006093 Oryza sativa Japonica Zhejiangnuo HP34
ERS006094 Oryza sativa Indica Hongmazhan HP591
ERS006095 Oryza sativa Indica Yangguzi-2 HP572
ERS006096 Oryza sativa Japonica Baikeshangu HP271
ERS006097 Oryza sativa Indica Shuilanzhanhongmi HP576
ERS006098 Oryza sativa Indica Haoanxiu HP529
ERS006099 Oryza sativa Indica Guangkehongmixianzhan HP292
ERS006100 Oryza sativa Indica Gaicao HP410
ERS006101 Oryza sativa Japonica Sanlicun-2 HP284
ERS006102 Oryza sativa Indica Jibiezi HP254
ERS006103 Oryza sativa Japonica Bufujin HP20
ERS006104 Oryza sativa Japonica Wenjiaojing HP80
ERS006105 Oryza sativa Japonica Laohonggu-2 HP564
ERS006106 Oryza sativa Indica Zhenzhunuo HP251
ERS006107 Oryza sativa Indica Bairizao-4 HP274
ERS006108 Oryza sativa Indica Baizaogu HP480
ERS006109 Oryza sativa Japonica Lizhidao HP9
ERS006110 Oryza sativa Indica Gaicaohuang HP437
ERS006111 Oryza sativa Indica Dayezao HP322
ERS006112 Oryza sativa Japonica Huajienuo-1 HP43
ERS006113 Oryza sativa Indica Damagu HP583
ERS006114 Oryza sativa Indica Ningdexian HP177
ERS006115 Oryza sativa Indica Makehong HP296
ERS006116 Oryza sativa Indica Wufenglengshuizhan HP247
ERS006117 Oryza sativa Indica Jiankenuo HP198
ERS006118 Oryza sativa Indica Guizhounuo HP249
ERS006119 Oryza sativa Indica Shapinghongjiaoqi HP429
ERS006120 Oryza sativa Japonica Wuyahe HP40
ERS006121 Oryza sativa Indica Haonuobi HP607
ERS006122 Oryza sativa Japonica Qiananshuinuo HP14
ERS006123 Oryza sativa Indica Huangdaozhan HP341
ERS006124 Oryza sativa Japonica Hongkenuo HP568
ERS006125 Oryza sativa Japonica Maomaogu HP67
ERS006126 Oryza sativa Indica Ribengu HP340
ERS006127 Oryza sativa Indica Qingganzhan HP360
ERS006128 Oryza sativa Indica Sanzibai HP459
ERS006129 Oryza sativa Indica Sizhan HP396
ERS006130 Oryza sativa Japonica Xishanbai HP363
ERS006131 Oryza sativa Indica Shaweizi HP515
ERS006132 Oryza sativa Indica Huazaobai HP189
ERS006133 Oryza sativa Indica Jiegunuo HP430
ERS006134 Oryza sativa Indica Zaowangzainuo HP495
ERS006135 Oryza sativa Indica Shanlinwan HP176
ERS006136 Oryza sativa Indica Maweinuo HP499
ERS006137 Oryza sativa Indica Changsuihe HP563
ERS006138 Oryza sativa Indica Hongkexian HP320
ERS006139 Oryza sativa Indica Zaonuo-2 HP279
ERS006140 Oryza sativa Japonica Wuzhenuo HP406
ERS006141 Oryza sativa Indica Yunyanghuang HP369
ERS006142 Oryza sativa Indica Chongyangnuo HP498
ERS006143 Oryza sativa Indica Simaobai HP238
ERS006144 Oryza sativa Japonica Youmangxiaohongbandao HP55
ERS006145 Oryza sativa Japonica Haotao HP425
ERS006146 Oryza sativa Indica Gaicaozhan HP460
ERS006147 Oryza sativa Japonica Heimangdao HP54
ERS006148 Oryza sativa Indica Xihuzao HP300
ERS006149 Oryza sativa Japonica Daodounuo HP532
ERS006150 Oryza sativa Indica Zaodaogu HP285
ERS006151 Oryza sativa Indica Dajinggu HP357
ERS006152 Oryza sativa Indica Yangguzi HP535
ERS006153 Oryza sativa Indica Zaobaigu HP579
ERS006154 Oryza sativa Indica Jiangzhan HP231
ERS006155 Oryza sativa Indica Magu-2 HP569
ERS006156 Oryza sativa Indica Dayeqing HP186
ERS006157 Oryza sativa Japonica Xiaobaimang HP384
ERS006158 Oryza sativa Indica Shanlan-19 HP242
ERS006159 Oryza sativa Japonica Hongmangdaliuyezi HP462
ERS006160 Oryza sativa Indica Yanzhan HP577
ERS006161 Oryza sativa Japonica Guangximi-2 HP587
ERS006162 Oryza sativa Indica Wusuobi HP188
ERS006163 Oryza sativa Indica Baihuazhan HP434
ERS006164 Oryza sativa Indica Yangmianzao HP333
ERS006165 Oryza sativa Indica Hongmimozhan HP332
ERS006166 Oryza sativa Japonica Guanyincao HP391
ERS006167 Oryza sativa Indica Feigenuo HP424
ERS006168 Oryza sativa Indica Jinbaoyin-3 HP208
ERS006169 Oryza sativa Japonica Maweizhan HP403
ERS006170 Oryza sativa Japonica Jiangbeilizhihong HP3
ERS006171 Oryza sativa Indica Danuo HP42
ERS006172 Oryza sativa Indica Hongmidongzhan HP503
ERS006173 Oryza sativa Indica Erzaogu HP61
ERS006174 Oryza sativa Indica Hongjiaoguang HP584
ERS006175 Oryza sativa Zhuoxianxiaobaidao HP381
ERS006176 Oryza sativa Japonica Laohonggu-1 HP466
ERS006177 Oryza sativa Indica Paoliuzhan HP479
ERS006178 Oryza sativa Japonica Wulongbei-3 HP17
ERS006179 Oryza sativa Indica Chima HP548
ERS006180 Oryza sativa Indica Guiyangnuo HP488
ERS006181 Oryza sativa Indica baimizai HP209
ERS006182 Oryza sativa Indica Zaohechi HP229
ERS006183 Oryza sativa Indica Suanguzao HP442
ERS006184 Oryza sativa Japonica Heinuomi-2 HP588
ERS006185 Oryza sativa Indica Erzhi HP217
ERS006186 Oryza sativa Japonica Ruandaozi HP52
ERS006187 Oryza sativa Japonica Tumangdao HP60
ERS006188 Oryza sativa Indica Shipishu HP199
ERS006189 Oryza sativa Indica Dahonggu HP311
ERS006190 Oryza sativa Indica Tuanzhuzao HP316
ERS006191 Oryza sativa Indica Qiuzhan HP477
ERS006192 Oryza sativa Indica Dayemaozhan HP261
ERS006193 Oryza sativa Japonica Hongkenuo(Jinkuazi) HP84
ERS006194 Oryza sativa Indica Jianan-9 HP411
ERS006195 Oryza sativa Indica Wushaogu HP433
ERS006196 Oryza sativa Indica Heijielan HP516
ERS006197 Oryza sativa Japonica Yanghuozhong HP4
ERS006198 Oryza sativa Indica Dayezao HP236
ERS006199 Oryza sativa Indica Taiwannuo HP191
ERS006200 Oryza sativa Japonica Wuzhunuo HP11
ERS006201 Oryza sativa Indica Guiyangzhan HP593
ERS006202 Oryza sativa Indica Xiangxian HP183
ERS006203 Oryza sativa Japonica Heiguzi HP602
ERS006204 Oryza sativa Indica Qimei-1 HP222
ERS006205 Oryza sativa Japonica Bendishuidao HP73
ERS006206 Oryza sativa Japonica Taohuami HP372
ERS006207 Oryza sativa Indica Wubaili HP531
ERS006208 Oryza sativa Indica Changmaozhan HP545
ERS006209 Oryza sativa Podao HP614
ERS006210 Oryza sativa Indica Huaihe HP214
ERS006211 Oryza sativa Indica Benguzhong HP302
ERS006212 Oryza sativa Indica Guangluai-4 HP999
ERS006213 Oryza sativa Indica Hongmimagu HP491
ERS006214 Oryza sativa Indica Heigu HP233
ERS006215 Oryza sativa Indica Mazhan HP487
ERS006216 Oryza sativa Indica Xiaobaigu HP604
ERS006217 Oryza sativa Indica Yangkenuo HP281
ERS006218 Oryza sativa Indica Ruanzhanjiugu HP263
ERS006219 Oryza sativa Indica Huazhan HP201
ERS006220 Oryza sativa Indica Lengshuima HP561
ERS006221 Oryza sativa Indica Wangu HP270
ERS006222 Oryza sativa Indica Qingganzhan HP578
ERS006223 Oryza sativa Indica Changweizhan HP232
ERS006224 Oryza sativa Indica Niutouwu HP520
ERS006225 Oryza sativa Japonica Heiyaonuo HP278
ERS006226 Oryza sativa Indica Dahongjiao-1 HP590
ERS006227 Oryza sativa Indica Gaochahe HP414
ERS006228 Oryza sativa Indica Jinzhan HP486
ERS006229 Oryza sativa Indica Zaomabao HP220
ERS006230 Oryza sativa Indica Hongxinnuo HP530
ERS006231 Oryza sativa Japonica Shanlan-36 HP74
ERS006232 Oryza sativa Japonica Laotaigu HP402
ERS006233 Oryza sativa Japonica Cungu HP358
ERS006234 Oryza sativa Japonica Baizhandao HP23
ERS006235 Oryza sativa Japonica Mazhan HP388
ERS006236 Oryza sativa Indica Bendiwan HP431
ERS006237 Oryza sativa Japonica Changmaodao-1-1 HP15
ERS006238 Oryza sativa Indica Ganhangunuo HP606
ERS006239 Oryza sativa Indica Dongzhouliu HP441
ERS006240 Oryza sativa Indica Wenchangzhan HP342
ERS006241 Oryza sativa Indica Zaogu-E HP458
ERS006242 Oryza sativa Indica Xiaomanggu HP546
ERS006243 Oryza sativa Indica Dabaihangu HP267
ERS006244 Oryza sativa Indica Shuibaitiao HP559
ERS006245 Oryza sativa Indica Yanong-1 HP392
ERS006246 Oryza sativa Japonica Wanjingbaimangdao HP8
ERS006247 Oryza sativa Indica Nantianzhan HP246
ERS006248 Oryza sativa Haoxiang HP594
ERS006249 Oryza sativa Indica Dashuihe HP417
ERS006250 Oryza sativa Indica Yanzhanzhong HP312
ERS006251 Oryza sativa Zhongjiaohuangmang HP63
ERS006252 Oryza sativa Indica Lengshuibai HP204
ERS006253 Oryza sativa Indica Jiaozhan HP547
ERS006254 Oryza sativa Indica Huanghuaxian HP318
ERS006255 Oryza sativa Japonica Danuodao HP56
ERS006256 Oryza sativa Japonica Xiaowujiaozhan HP88
ERS006257 Oryza sativa Indica Maonuo-2 HP277
ERS006258 Oryza sativa Indica Zaokengji HP521
ERS006259 Oryza sativa Indica Dayaozhan HP224
ERS006260 Oryza sativa Indica Hunuo HP497
ERS006261 Oryza sativa Indica Honghandao-1 HP319
ERS006262 Oryza sativa Indica Xiangguzhong HP354
ERS006263 Oryza sativa Indica Youzhannuo HP352
ERS006264 Oryza sativa Indica Sanlicun-6 HP194
ERS006265 Oryza sativa Indica Hongkebao HP418
ERS006266 Oryza sativa Indica Ermaoxiang HP558
ERS006267 Oryza sativa Indica Wuke-4 HP609
ERS006268 Oryza sativa Indica Xiaohongmi HP595
ERS006269 Oryza sativa Indica Hongdounuo HP197
ERS006270 Oryza sativa Indica Huohandao HP252
ERS006271 Oryza sativa Indica Shuihegu HP492
ERS006272 Oryza sativa Indica Jijiaonuo HP356
ERS006273 Oryza sativa Japonica Fanzhan HP525
ERS006274 Oryza sativa Japonica Sanlicun-1 HP389
ERS006275 Oryza sativa Japonica Sanlicun-4 HP378
ERS006276 Oryza sativa Indica Laohonggu-3 HP467
ERS006277 Oryza sativa Indica Makezhan-1 HP475
ERS006278 Oryza sativa Japonica Heizhandaosong HP68
ERS006279 Oryza sativa Japonica Shenxiangu HP375
ERS006280 Oryza sativa Indica Huangkejin HP76
ERS006281 Oryza sativa Indica Bairizao HP365
ERS006282 Oryza sativa Indica Hongmigu HP570
ERS006283 Oryza sativa Indica Nantexuan HP613
ERS006284 Oryza sativa Japonica Muzibai HP468
ERS006285 Oryza sativa Indica Huangyadao HP427
ERS006286 Oryza sativa Indica Yizhixiangshu HP212
ERS006287 Oryza sativa Indica Banshanxian HP184
ERS006288 Oryza sativa Japonica Mahuangnuo HP585
ERS006289 Oryza sativa Japonica Huangkexianzhan-1 HP554
ERS006290 Oryza sativa Indica Hualuozhan HP526
ERS006291 Oryza sativa Indica Yanjing HP179
ERS006292 Oryza sativa Indica Maweixian HP190
ERS006293 Oryza sativa Japonica Nipponbare HP997
ERS006294 Oryza sativa Japonica Xiaodongdao HP439
ERS006295 Oryza sativa Indica Dahuayao HP351
ERS006296 Oryza sativa Japonica Jizhuazi(Jing) HP66
ERS006297 Oryza sativa Indica Haonuobixian HP608
ERS006298 Oryza sativa Japonica Gaojiaohuang HP371
ERS006299 Oryza sativa Indica Huangkemazhan HP552
ERS006300 Oryza sativa Indica Baiguxiang HP297
ERS006301 Oryza sativa Indica Shunhaixiaomagu HP551
ERS006302 Oryza sativa Indica Quanzhounuo HP490
ERS006303 Oryza sativa Japonica Lengshuizhan HP314
ERS006304 Oryza sativa Japonica Gaolihandao HP385
ERS006305 Oryza sativa Indica Erpozao HP565
ERS006306 Oryza sativa Indica Maguhongmi HP327
ERS006307 Oryza sativa Indica Salamagu-1 HP603
ERS006308 Oryza sativa Indica Dengbaoqi HP394
ERS006309 Oryza sativa Zaodao HP28
ERS006310 Oryza sativa Indica Hongmiqinghezhan HP474
ERS006311 Oryza sativa Japonica Chiwudao HP5
ERS006312 Oryza sativa Indica Baixianzi HP432
ERS006313 Oryza sativa Indica Aizinuo HP291
ERS006314 Oryza sativa Japonica Dalizhan HP25
ERS006315 Oryza sativa Indica Yahezhong HP237
ERS006316 Oryza sativa Japonica Banbiannuo-1 HP574
ERS006317 Oryza sativa Indica Qihe HP230
ERS006318 Oryza sativa Indica Mazhan-3 HP580
ERS006319 Oryza sativa Japonica Tainanxuan-370 HP10
ERS006320 Oryza sativa Indica Tuogu HP514
ERS006321 Oryza sativa Japonica Fengrunhandaozi HP13
ERS006322 Oryza sativa Indica Yezhugu HP589
ERS006323 Oryza sativa Indica Guangxuhe HP493
ERS006324 Oryza sativa Indica Bayuenuo HP187
ERS006325 Oryza sativa Indica Xiyeqing HP185
ERS006326 Oryza sativa Japonica Hongdao(Jingualao) HP86
ERS006327 Oryza sativa Indica Yunnanzao-2 HP405
ERS006328 Oryza sativa Japonica Dahuangdao HP51
ERS006329 Oryza sativa Indica Damagu-2 HP446
ERS006330 Oryza sativa Indica Wukejian HP210
ERS006331 Oryza sativa Indica Qingshandao HP393
ERS006332 Oryza sativa Indica Youzhan HP457
ERS006333 Oryza sativa Indica Mamahuang HP510
ERS006334 Oryza sativa Indica Hanhe HP298
ERS006335 Oryza sativa Japonica Baikeainuo HP64
ERS006336 Oryza sativa Indica Dabaiwangu HP420
ERS006337 Oryza sativa Indica Longyazhan-16 HP456
ERS006338 Oryza sativa Japonica Wukedao HP7
ERS006339 Oryza sativa Indica Changainuo HP250
ERS006340 Oryza sativa Indica Hongminuo HP560
ERS006341 Oryza sativa Indica Dabaizao HP221
ERS006342 Oryza sativa Indica Leigongman HP213
ERS006343 Oryza sativa Indica Gedadao HP257
ERS006344 Oryza sativa Indica Makenuo HP567
ERS006345 Oryza sativa Indica Yayou HP310
ERS006346 Oryza sativa Indica Xiaobaidao HP367
ERS006347 Oryza sativa Indica Dingzhounuo HP205
ERS006348 Oryza sativa Indica Qitouhuang HP337
ERS006349 Oryza sativa Japonica Honggunuo HP398
ERS006350 Oryza sativa Indica Jinjizao HP323
ERS006351 Oryza sativa Sanlicun-5 HP293
ERS006352 Oryza sativa Indica Pangqiunuo HP235
ERS006353 Oryza sativa Indica 503 HP295
ERS006354 Oryza sativa Indica Haonuoliang HP422
ERS006355 Oryza sativa Indica Mandahongzao HP469
ERS006356 Oryza sativa Indica Daguangmazhan HP533
ERS006357 Oryza sativa Japonica Xiaohongguzi HP81
ERS006358 Oryza sativa Indica Jiangxiwan HP476
ERS006359 Oryza sativa Japonica Zunhuawenzizui HP12
ERS006360 Oryza sativa Japonica Banlikenuo HP586
ERS006361 Oryza sativa Indica Baikezao HP518
ERS006362 Oryza sativa Indica Laobaijing HP527
ERS006363 Oryza sativa Indica Wanjinxian HP234
ERS006364 Oryza sativa Indica Dahongjiao-2 HP553
ERS006365 Oryza sativa Indica Jianongxianyu-40 HP228
ERS006366 Oryza sativa Indica Bodao HP339
ERS006367 Oryza sativa Indica Shiyanggu HP269
ERS006368 Oryza sativa Indica Baimiwujuzhan HP542
ERS006369 Oryza sativa Indica Luanjiaohuangzhan HP268
ERS006370 Oryza sativa Indica Bangbanggu HP362
ERS006371 Oryza sativa Japonica Changmangnuo-1 HP53
ERS006372 Oryza sativa Indica Wugongzao HP366
ERS006373 Oryza sativa Indica Gaicaohuang-2 HP380
ERS006374 Oryza sativa Japonica Zhankenuo-2 HP272
ERS006375 Oryza sativa Japonica Hongmangnuo HP48
ERS006376 Oryza sativa Japonica Baikezhan-1 HP454
ERS006377 Oryza sativa Indica Haiwu HP202
ERS006378 Oryza sativa Indica Xiaomagu HP508
ERS006379 Oryza sativa Indica Jiuyuezai HP343
ERS006380 Oryza sativa Indica Heinuo HP349
ERS006381 Oryza sativa Indica Babaili HP509
ERS006382 Oryza sativa Indica Jinkounuo HP395
ERS006383 Oryza sativa Japonica Handao-3-1 HP16
ERS006384 Oryza sativa Indica Aijiaozhong HP353
ERS006385 Oryza sativa Japonica Luonuo HP605
ERS006386 Oryza sativa Indica Liuzhuzhan HP218
ERS006387 Oryza sativa Indica Tieshannuo HP301
ERS006388 Oryza sativa Indica Nuoganzi HP575
ERS006389 Oryza sativa Indica Nanxiangzao HP336
ERS006390 Oryza sativa Japonica Honggu-1 HP44
ERS006391 Oryza sativa Indica Chengduhonggu HP75
ERS006392 Oryza sativa Heizaogu HP519
ERS006393 Oryza sativa Indica Jiangxizhan HP501
ERS006394 Oryza sativa Indica Magu-1 HP534
ERS006395 Oryza sativa Indica Shaozhimanzhong HP200
ERS006396 Oryza sativa Indica Panyeqing HP193
ERS006397 Oryza sativa Indica Maweibaimizhan HP592
ERS006398 Oryza sativa Indica Zhenfanzi HP306
ERS006399 Oryza sativa Japonica Baimihuangzhan HP330
ERS006400 Oryza sativa Japonica Honggudao HP258
ERS006401 Oryza sativa Indica Datouhuang HP438
ERS006402 Oryza sativa Indica Xilanzhan HP361
ERS006403 Oryza sativa Japonica Hangunuo HP315
ERS006404 Oryza sativa Japonica Huangganxian HP426
ERS006405 Oryza sativa Indica Xiangzhan HP502
ERS006406 Oryza sativa Indica Hongguzi HP379
ERS006407 Oryza sativa Japonica Zhandaozi HP22
ERS006408 Oryza sativa Indica Honghandao-2 HP305
ERS006409 Oryza sativa Indica Hongnuo HP69
ERS006410 Oryza sativa Japonica Changmangnuo-2 HP31
ERS006411 Oryza sativa Indica Makezhan-2 HP324
ERS006412 Oryza sativa Indica Ershiyihao HP455
ERS006413 Oryza sativa Japonica Baishanuo HP36
ERS006414 Oryza sativa Indica Baimidongzhan HP481
ERS006415 Oryza sativa Indica Honghanzhangu HP445
ERS006416 Oryza sativa Indica Zaodao HP598
ERS006417 Oryza sativa Indica Haogailan HP423
ERS006418 Oryza sativa Japonica Fandao HP6
ERS006419 Oryza sativa Japonica Lengshuixiaobaigu HP436
ERS006420 Oryza sativa Indica Qiyulenghe HP416
ERS006421 Oryza sativa Indica Maweizhan HP494
ERS006422 Oryza sativa Indica Hongbendao HP449
ERS006423 Oryza sativa Indica Dayeliu HP195
ERS006424 Oryza sativa Shuangliushangu HP223
ERS006425 Oryza sativa Indica Baishazhan HP538
ERS006426 Oryza sativa Indica Suixihongxu HP348
ERS006427 Oryza sativa Japonica Sanlicun-3 HP331
ERS006428 Oryza sativa Indica Dahangu-2 HP266
ERS006429 Oryza sativa Indica Yumidao HP506
ERS006430 Oryza sativa Indica Likehandao HP255
ERS006431 Oryza sativa Indica Qinglannuo HP610
ERS006432 Oryza sativa Japonica Koumalang HP72
ERS006433 Oryza sativa Japonica Huangjinnuojiugu HP87
ERS006434 Oryza sativa Indica Hongmimagu-2 HP571
ERS006435 Oryza sativa Indica Makezao HP262
ERS006436 Oryza sativa Indica Hongkedao HP321
ERS006437 Oryza sativa Japonica Guizinuo HP401
ERS006438 Oryza sativa Indica Xuzhan HP540
ERS006439 Oryza sativa Indica Xuanzhan HP482
ERS006440 Oryza sativa Indica Fengleng HP582
ERS006441 Oryza sativa Indica Guihuanuo HP383
ERS006442 Oryza sativa Indica Hongzuigu HP412
ERS006443 Oryza sativa Indica Jinbaoyin-2 HP573
ERS006444 Oryza sativa Indica Heixiaonuo HP71
ERS006445 Oryza sativa Indica Jiandaoqi HP507
ERS006446 Oryza sativa Indica Yizhuai HP180
ERS006447 Oryza sativa Japonica Miandianjiugu HP511
ERS006448 Oryza sativa Indica Anhuihe HP485
ERS006449 Oryza sativa Japonica Nuziliwa HP59
ERS006450 Oryza sativa Indica Baiganzhan HP556
ERS006451 Oryza sativa Indica Xibengu HP303
ERS006452 Oryza sativa Japonica Dayegu HP282
ERS006453 Oryza sativa Indica Dahongjiao-3 HP597
ERS006454 Oryza sativa Japonica Haipuxiaohongzhan HP309
ERS006455 Oryza sativa Indica Baijiugu HP373
ERS006456 Oryza sativa Japonica Heikejiangmi HP32
ERS006457 Oryza sativa Indica Banjiuyan HP513
ERS006458 Oryza sativa Indica Baimiyahzouzao HP444
ERS006459 Oryza sativa Indica Zaoxuanzhan HP543
ERS006460 Oryza sativa Indica Chuangnuo-2 HP549
ERS006461 Oryza sativa Indica Wushizao HP448
ERS006462 Oryza sativa Indica 77-2087 HP504
ERS006463 Oryza sativa Indica Heigudadao HP196
ERS006464 Oryza sativa Japonica Changlijingzhan HP45
ERS006465 Oryza sativa Hongxian HP178
ERS006466 Oryza sativa Japonica Sankecun HP280
ERS006467 Oryza sativa Indica Baipigu HP415
ERS006468 Oryza sativa Japonica Hangu-2 HP70
ERS006469 Oryza sativa Indica Baiguomaweizhan HP471
ERS006470 Oryza sativa Indica Hongjiaozhan HP287
ERS006471 Oryza sativa Indica Keliuzao HP544
ERS006472 Oryza sativa Indica Gouzaizhan HP350
ERS006473 Oryza sativa Indica Maogu HP550
ERS006474 Oryza sativa Indica Chongfubao HP612
ERS006475 Oryza sativa Indica Hongmizhong HP522
ERS006476 Oryza sativa Indica Nantehao HP505
ERS006477 Oryza sativa Indica Huangdao HP26
ERS006478 Oryza sativa Indica Shaowubai HP387
ERS006479 Oryza sativa Indica Chuanda-1 HP452
ERS006480 Oryza sativa Indica Hongmiguyoumang HP215
ERS006481 Oryza sativa Indica Anqinggu HP219
ERS006482 Oryza sativa Japonica Hongkenuoxuan HP37
ERS006483 Oryza sativa Indica Hongshannuo HP290
ERS006484 Oryza sativa Indica Daosiji HP325
ERS011148 Oryza sativa Indica Guangluai-4
ERS011149 Oryza sativa Japonica Nongken-58
ERS039279 Oryza sativa Japonica Huoshaodahe HP24
ERS039280 Oryza sativa Japonica Qiangdao HP29
ERS039281 Oryza sativa Japonica Huanghong HP35
ERS039282 Oryza sativa Japonica Dabainuo HP38
ERS039283 Oryza sativa Japonica Rongbai HP39
ERS039284 Oryza sativa Xuanhuangnuo HP41
ERS039285 Oryza sativa Japonica Maguzhi HP49
ERS039286 Oryza sativa Japonica Hangdao HP58
ERS039287 Oryza sativa Japonica Hongguzi HP83
ERS039288 Oryza sativa Japonica Heiguzi HP89
ERS039289 Oryza sativa Japonica Wangduhangjingzi HP90
ERS039290 Oryza sativa Japonica Changmadao-3 HP91
ERS039291 Oryza sativa Japonica Hangdao-1 HP92
ERS039292 Oryza sativa Japonica Wumangshuidao-2 HP93
ERS039293 Oryza sativa Japonica Youmangshuidao-1 HP94
ERS039294 Oryza sativa Japonica Hongjian HP95
ERS039295 Oryza sativa Japonica Erjiedao HP96
ERS039296 Oryza sativa Japonica Jinggou HP97
ERS039297 Oryza sativa Japonica Luyu132-1 HP98
ERS039298 Oryza sativa Japonica Zhilishui HP99
ERS039299 Oryza sativa Japonica Baizhidao HP100
ERS039300 Oryza sativa Japonica Jiuniandao HP101
ERS039301 Oryza sativa Japonica Jinggoudan HP102
ERS039302 Oryza sativa Japonica Binxianludao HP103
ERS039303 Oryza sativa Japonica Boshun-2 HP104
ERS039304 Oryza sativa Japonica Xingrenxiaobaiwanggu HP105
ERS039305 Oryza sativa Japonica Shikui HP106
ERS039306 Oryza sativa Japonica Baibanghuinuo-2 HP107
ERS039307 Oryza sativa Japonica Hanghe HP108
ERS039308 Oryza sativa Japonica Maomaonuo HP109
ERS039309 Oryza sativa Japonica Duandingmongbaimi HP110
ERS039310 Oryza sativa Japonica Lengshuixian HP111
ERS039311 Oryza sativa Japonica Baikehandao HP112
ERS039312 Oryza sativa Japonica Laohuanggu HP113
ERS039313 Oryza sativa Japonica Yanzhigu HP114
ERS039314 Oryza sativa Japonica Hongbeizigu HP115
ERS039315 Oryza sativa Japonica Baidadu HP116
ERS039316 Oryza sativa Japonica Youmangzhandao HP117
ERS039317 Oryza sativa Indica Huakemangnuo HP119
ERS039318 Oryza sativa Indica Shanglanxiannuo-19 HP120
ERS039319 Oryza sativa Indica Zhuxuenuo HP121
ERS039320 Oryza sativa Japonica Fenglinghuangmaozi HP122
ERS039321 Oryza sativa Japonica Tangxianxiaonaoguan HP123
ERS039322 Oryza sativa Japonica Xingtaidaozi HP124
ERS039323 Oryza sativa Japonica Xiatiandai-5 HP125
ERS039324 Oryza sativa Japonica Wuyishuidao HP127
ERS039325 Oryza sativa Japonica Xiaohouerbei HP128
ERS039326 Oryza sativa Japonica Zhuyiedao HP129
ERS039327 Oryza sativa Japonica Huangchuanhuihangdao HP130
ERS039328 Oryza sativa Japonica Longhuamaohulu HP131
ERS039329 Oryza sativa Japonica Qiangdaohuo HP132
ERS039330 Oryza sativa Japonica Niushizijing HP133
ERS039331 Oryza sativa Japonica Jijiaonuo HP134
ERS039332 Oryza sativa Japonica Yangnuodao HP135
ERS039333 Oryza sativa Japonica Yueziguang HP136
ERS039334 Oryza sativa Japonica Huanggennuo HP137
ERS039335 Oryza sativa Japonica Xianggennuo HP138
ERS039336 Oryza sativa Japonica Niulangmiaogen HP139
ERS039337 Oryza sativa Japonica Youmangxiaobaiwang HP140
ERS039338 Oryza sativa Japonica Hongnuo HP141
ERS039339 Oryza sativa Japonica Zhareke HP142
ERS039340 Oryza sativa Indica Langxihongken HP143
ERS039341 Oryza sativa Indica Xianghenuo HP144
ERS039342 Oryza sativa Japonica Xiaominian HP145
ERS039343 Oryza sativa Japonica Shangpiannian HP146
ERS039344 Oryza sativa Japonica Dahonggu HP147
ERS039345 Oryza sativa Japonica Hongminuo HP148
ERS039346 Oryza sativa Indica Guanglong-1 HP149
ERS039347 Oryza sativa Japonica Muxinuo HP150
ERS039348 Oryza sativa Japonica Honggen HP151
ERS039349 Oryza sativa Japonica Baigen HP152
ERS039350 Oryza sativa Japonica Mengjama-2 HP153
ERS039351 Oryza sativa Japonica Lipinghangnuo HP154
ERS039352 Oryza sativa Japonica Heinuo-2 HP155
ERS039353 Oryza sativa Japonica Dahuanggu HP156
ERS039354 Oryza sativa Japonica Changmaonian HP157
ERS039355 Oryza sativa Japonica Makenian HP158
ERS039356 Oryza sativa Japonica Jialigen-1 HP159
ERS039357 Oryza sativa Japonica Ernianbai HP160
ERS039358 Oryza sativa Japonica Jiyuanhandao HP161
ERS039359 Oryza sativa Japonica Mahuangkejingnuo HP162
ERS039360 Oryza sativa Japonica Heinuo HP163
ERS039361 Oryza sativa Indica Huihuinuo HP164
ERS039362 Oryza sativa Japonica Zhaoshixiang HP165
ERS039363 Oryza sativa Japonica Xuxuwangmi HP166
ERS039364 Oryza sativa Indica Nuozhagu HP167
ERS039365 Oryza sativa Japonica Dalinian HP168
ERS039366 Oryza sativa Japonica Hanggu HP169
ERS039367 Oryza sativa Japonica Zhaoshuhupihuangmangdao HP170
ERS039368 Oryza sativa Japonica Hupiwumangnuo HP171
ERS039369 Oryza sativa Japonica Magunuo HP172
ERS039370 Oryza sativa Japonica Zhuniaonuo HP173
ERS039371 Oryza sativa Indica Hangxiandahezi HP174
ERS039372 Oryza sativa Japonica Songping HP175
ERS039373 Oryza sativa Japonica Zhonghua11 HP990
ERS039374 Oryza sativa Indica Nanjing-6 HP991
ERS039375 Oryza sativa Japonica Chunjian-6 HP992
ERS039376 Oryza sativa Indica Zhefu-802 HP993
ERS039377 Oryza sativa Indica Tainan-1 HP994
ERS039378 Oryza sativa Japonica Xiushui-11 HP995
SRS086324 Oryza nivara 042/87/34
SRS086325 Oryza rufipogon PADI PADIAN
SRS086326 Oryza rufipogon DAL DHAN
SRS086327 Oryza nivara MV 89-80
SRS086328 Oryza nivara L 89-12
SRS086329 Oryza sativa Japonica Maintmolotsy
SRS086330 Oryza sativa Japonica Ta Hung Ku
SRS086331 Oryza sativa Japonica Kitrana 508
SRS086332 Oryza sativa Indica Mehr
SRS086333 Oryza sativa Japonica Jambu
SRS086334 Oryza sativa Japonica Haginomae Mochi
SRS086335 Oryza sativa Indica Miriti
SRS086336 Oryza sativa Japonica Binulawan
SRS086337 Oryza sativa Japonica Darmali
SRS086338 Oryza sativa Indica Leung Pratew
SRS086339 Oryza sativa Indica IR36
SRS086340 Oryza sativa Japonica KUI SALI
SRS086341 Oryza sativa Japonica Phudugey
SRS086342 Oryza sativa Japonica AZUCENA
SRS086343 Oryza sativa Japonica NPE 844
SRS086344 Oryza sativa Japonica Bico Branco
SRS086345 Oryza sativa Japonica Norin20
SRS086346 Oryza sativa Japonica Arias
SRS086347 Oryza sativa Japonica Gotak Gatik
SRS086348 Oryza sativa Indica Popot 165
SRS086349 Oryza sativa Japonica Trembese
SRS086350 Oryza sativa Indica Kalamkati
SRS086351 Oryza sativa Japonica Canella De Ferro
SRS086352 Oryza sativa Indica Ai-Chiao-Hong
SRS086353 Oryza sativa Indica Guan-Yin-Tsan
SRS086354 Oryza sativa Japonica Chodongji
SRS086355 Oryza sativa HAISHA CAMAN
SRS086356 Oryza sativa Indica Jhona 349
SRS086357 Oryza sativa BADAL 89
SRS086358 Oryza sativa Japonica Lemont
SRS086359 Oryza nivara HK 47
SRS086360 Oryza sativa Japonica Mansaku
SRS086361 Oryza sativa Indica Gie 57
SRS086362 Oryza sativa Japonica Davao
SRS086363 Oryza sativa Indica DZ78
SRS086364 Oryza nivara CA 97-053
SRS086365 Oryza sativa Japonica JC101
SRS086366 Oryza sativa Japonica JC111
SRS086367 Oryza sativa Indica TD2
SRS086368 Oryza sativa Indica JC91
SRS086369 Oryza sativa Japonica Nipponbare
SRS086370 Oryza rufipogon P46
SRS086371 Oryza sativa Japonica Firooz
SRS086372 Oryza rufipogon VOC4
SRS086373 Oryza rufipogon Yuan 3-9
SRS151699 Oryza sativa Japonica Kitaake
SRS190862 Oryza sativa Indica IR64
SRS190905 Oryza sativa Indica N22
SRS190906 Oryza sativa Indica Minghui


SRA sample ID species Subspecies strain ID
SRS005472 Zea mays mays B73
SRS005473 Zea mays mays B97
SRS005474 Zea mays mays CML103
SRS005475 Zea mays mays CML228
SRS005476 Zea mays mays CML247
SRS005477 Zea mays mays CML277
SRS005478 Zea mays mays CML322
SRS005479 Zea mays mays CML333
SRS005480 Zea mays mays CML52
SRS005481 Zea mays mays CML69
SRS005482 Zea mays mays Hp301
SRS005483 Zea mays mays Il14H
SRS005484 Zea mays mays Ki11
SRS005485 Zea mays mays Ki3
SRS005486 Zea mays mays Ky21
SRS005487 Zea mays mays M162W
SRS005488 Zea mays mays M37W
SRS005489 Zea mays mays Mo17
SRS005490 Zea mays mays Mo18W
SRS005491 Zea mays mays MS71
SRS005492 Zea mays mays NC350
SRS005493 Zea mays mays NC358
SRS005494 Zea mays mays Oh43
SRS005495 Zea mays mays Oh7B
SRS005496 Zea mays mays P39
SRS005497 Zea mays mays Tx303
SRS005498 Zea mays mays Tzi8
SRS005499 Zea mays mays CML52-B73_BC
SRS007461 Zea mays mays Zheng58 CAU01
SRS007462 Zea mays mays Chang7-2 CAU02
SRS007463 Zea mays mexicana 178 CAU03
SRS007464 Zea mays mays 5003 CAU04
SRS007465 Zea mays mays 478 CAU05
SRS007466 Zea mays mays Mo17
SRS114983 Zea mays mays Mo17
SRS150650 Zea mays mays B73 USDA-ARS accession: PI 550473
SRS150655 Zea luxurians USDA-ARS accession: PI441933
SRS293545 Zea mays mays zheng58 CAU01
SRS293551 Zea mays mays chang7-2 CAU02
SRS293553 Zea mays mays 5003 CAU04
SRS293554 Zea mays mays 478 CAU05
SRS293555 Zea mays mays zong31 CAU06
SRS293556 Zea mays mays D340 CAU07
SRS293557 Zea mays mays H127 CAU08
SRS293559 Zea mays mays yu87-1 CAU10
SRS293560 Zea mays mays shen5005 CAU100
SRS293561 Zea mays mays 807D CAU103
SRS293562 Zea mays mays 1145 CAU105
SRS293563 Zea mays mays D15 CAU107
SRS293564 Zea mays mays longkang11 CAU11
SRS293567 Zea mays mays S22 CAU112
SRS293568 Zea mays mays Q1261 CAU114
SRS293569 Zea mays mays ye52106 CAU115
SRS293570 Zea mays mays 1205A CAU116
SRS293571 Zea mays mays K12 CAU118
SRS293572 Zea mays mays danhuang02 CAU12
SRS293573 Zea mays mays xing230 CAU120
SRS293574 Zea mays mays K22 CAU125
SRS293575 Zea mays mays P007 CAU129
SRS293578 Zea mays mays Yd6 CAU131
SRS293579 Zea mays mays IA5125 CAU132
SRS293580 Zea mays mays liao2202 CAU133
SRS293581 Zea mays mays dai6 CAU134
SRS293582 Zea mays mays W499 CAU137
SRS293583 Zea mays mays shen137 CAU14
SRS293584 Zea mays mays XOP2 CAU140
SRS293585 Zea mays mays D20 CAU142
SRS293586 Zea mays mays hai1134 CAU143
SRS293587 Zea mays mays yu374 CAU144
SRS293588 Zea mays mays dan9064 CAU146
SRS293589 Zea mays mays niu2-1 CAU147
SRS293590 Zea mays mays suwan1611 CAU148
SRS293591 Zea mays mays R017 CAU149
SRS293593 Zea mays mays zheng22 CAU15
SRS293594 Zea mays mays shen977 CAU151
SRS293595 Zea mays mays huangchangb CAU156
SRS293596 Zea mays mays lv28 CAU16
SRS293597 Zea mays mays K10 CAU164
SRS293598 Zea mays mays ye5237 CAU165
SRS293599 Zea mays mays zheng32 CAU166
SRS293600 Zea mays mays huangC CAU17
SRS293601 Zea mays mays P167 CAU173
SRS293602 Zea mays mays R31 CAU174
SRS293603 Zea mays mays changK CAU178
SRS293604 Zea mays mays P138 CAU18
SRS293605 Zea mays mays M131-5 CAU180
SRS293606 Zea mays mays zi330 CAU19
SRS293607 Zea mays mays hai014 CAU191
SRS293608 Zea mays mays ji444 CAU192
SRS293609 Zea mays mays ben7884 CAU193
SRS293610 Zea mays mays huangyesi3 CAU194
SRS293611 Zea mays mays zaC546 CAU195
SRS293612 Zea mays mays ji846 CAU196
SRS293613 Zea mays mays 4F1 CAU197
SRS293614 Zea mays mays wenhuang31413 CAU198
SRS293615 Zea mays mays ye515 CAU199
SRS293616 Zea mays mays huangzaosi CAU20
SRS293617 Zea mays mays hu803 CAU200
SRS293618 Zea mays mays tian77 CAU201
SRS293619 Zea mays mays ye488 CAU202
SRS293620 Zea mays mays chang72 CAU203
SRS293621 Zea mays mays 3H2 CAU207
SRS293622 Zea mays mays cheng698-3 CAU208
SRS293623 Zea mays mays tie7922 CAU21
SRS293624 Zea mays mays su75 CAU210
SRS293625 Zea mays mays Beck CAU211
SRS293626 Zea mays mays P136 CAU215
SRS293627 Zea mays mays dan9046 CAU217
SRS293628 Zea mays mays H99 CAU223
SRS293629 Zea mays mays W64a CAU224
SRS293630 Zea mays mays A554 CAU225
SRS293631 Zea mays mays xun92-8 CAU229
SRS293632 Zea mays mays H21 CAU234
SRS293633 Zea mays mays shuang741 CAU235
SRS293634 Zea mays mays 200B CAU236
SRS293635 Zea mays mays chong72 CAU237
SRS293636 Zea mays mays Pa91 CAU238
SRS293637 Zea mays mays yu537A CAU239
SRS293638 Zea mays mays 9058 CAU24
SRS293639 Zea mays mays dan3115 CAU242
SRS293640 Zea mays mays zhonghuang64 CAU244
SRS293641 Zea mays mays dong327 CAU247
SRS293642 Zea mays mays 698-3 CAU248
SRS293643 Zea mays mays ji853 CAU25
SRS293644 Zea mays mays N138 CAU251
SRS293645 Zea mays mays DM07 CAU254
SRS293646 Zea mays mays B100 CAU256
SRS293647 Zea mays mays B98 CAU257
SRS293648 Zea mays mays lian87 CAU261
SRS293649 Zea mays mays L-1 CAU264
SRS293650 Zea mays mays B8 CAU268
SRS293651 Zea mays mays ye8112 CAU27
SRS293652 Zea mays mays changD CAU271
SRS293653 Zea mays mays M14 CAU272
SRS293654 Zea mays mays M101 CAU273
SRS293655 Zea mays mays B394 CAU275
SRS293749 Zea mays mays R25 CAU282
SRS293750 Zea mays mays chengzi108 CAU283
SRS293751 Zea mays mays ye107 CAU289
SRS293752 Zea mays mays Maxa CAU29
SRS293753 Zea mays mays jiutai1 CAU290
SRS293754 Zea mays mays hai9-21 CAU294
SRS293755 Zea mays mays ji533 CAU295
SRS293756 Zea mays mays W344 CAU297
SRS293757 Zea mays mays B76 CAU302
SRS293758 Zea mays mays NC268 CAU303
SRS293759 Zea mays mays Sg1533 CAU306
SRS293760 Zea mays mays W117 CAU308
SRS293761 Zea mays mays wu126 CAU31
SRS293762 Zea mays mays 7327 CAU310
SRS293763 Zea mays mays bao3040 CAU316
SRS293764 Zea mays mays Lx9801 CAU320
SRS293765 Zea mays mays shen135 CAU326
SRS293767 Zea mays mays yi36 CAU33
SRS293768 Zea mays mays baihe43 CAU332
SRS293769 Zea mays mays nan21-3 CAU34
SRS293770 Zea mays mays jiu138-5 CAU345
SRS293771 Zea mays mays ning55 CAU347
SRS293772 Zea mays mays han21 CAU350
SRS293773 Zea mays mays huotanghuang CAU355
SRS293774 Zea mays mays yu82 CAU357
SRS293775 Zea mays mays CN165 CAU359
SRS293776 Zea mays mays fu8701 CAU361
SRS293777 Zea mays mays De811 CAU362
SRS293778 Zea mays mays B7 CAU364
SRS293779 Zea mays mays shan89 CAU365
SRS293780 Zea mays mays A679 CAU366
SRS293781 Zea mays mays Va26 CAU367
SRS293782 Zea mays mays E28 CAU370
SRS293783 Zea mays mays zhongyin15 CAU372
SRS293784 Zea mays mays zong3 CAU375
SRS293785 Zea mays mays A632 CAU38
SRS293786 Zea mays mays FC-13 CAU382
SRS293787 Zea mays mays ji63 CAU384
SRS293788 Zea mays mays ji434 CAU385
SRS293789 Zea mays mays ji4112 CAU386
SRS293790 Zea mays mays qi205 CAU389
SRS293791 Zea mays mays CM105 CAU39
SRS293792 Zea mays mays B68 CAU40
SRS293793 Zea mays mays P25 CAU400
SRS293794 Zea mays mays R98 CAU401
SRS293795 Zea mays mays qi319 CAU402
SRS293796 Zea mays mays huo17 CAU405
SRS293797 Zea mays mays huangyesi CAU409
SRS293798 Zea mays mays P39 CAU41
SRS293799 Zea mays mays shen142 CAU411
SRS293800 Zea mays mays siyi CAU413
SRS293801 Zea mays mays xun971 CAU416
SRS293802 Zea mays mays shangyin110-1 CAU42
SRS293803 Zea mays mays Mo24W CAU420
SRS293804 Zea mays mays CI66 CAU421
SRS293805 Zea mays mays W182bn CAU422
SRS293806 Zea mays mays W153R CAU423
SRS293807 Zea mays mays HP301 CAU425
SRS293808 Zea mays mays H84 CAU426
SRS293809 Zea mays mays H105W CAU427
SRS293810 Zea mays mays tangsipingtou CAU429
SRS293811 Zea mays mays cheng18 CAU434
SRS293812 Zea mays mays xinlun5-9 CAU436
SRS293813 Zea mays mays lv45 CAU439
SRS293814 Zea mays mays fengke1 CAU446
SRS293815 Zea mays mays ernan24 CAU448
SRS293816 Zea mays mays 78371A CAU451
SRS293817 Zea mays mays PHT10 CAU452
SRS293818 Zea mays mays PHH93 CAU453
SRS293819 Zea mays mays IBB14 CAU454
SRS293820 Zea mays mays LH149 CAU458
SRS293821 Zea mays mays zhong451 CAU46
SRS293822 Zea mays mays 794 CAU461
SRS293823 Zea mays mays PHR32 CAU463
SRS293824 Zea mays mays PHG50 CAU465
SRS293825 Zea mays mays LH51 CAU466
SRS293826 Zea mays mays 78010 CAU468
SRS294442 Zea mays mays huotanghuang17 CAU47
SRS294443 Zea mays mays LH39 CAU470
SRS294444 Zea mays mays PHG84 CAU471
SRS294445 Zea mays mays LH57 CAU475
SRS294446 Zea mays mays LH38 CAU476
SRS294447 Zea mays mays 807 CAU488
SRS294448 Zea mays mays OH43 CAU489
SRS294449 Zea mays mays PHN11 CAU490
SRS294450 Zea mays mays PHJ70 CAU491
SRS294451 Zea mays mays DJ7 CAU492
SRS294452 Zea mays mays 790 CAU496
SRS294453 Zea mays mays PHZ51 CAU497
SRS294454 Zea mays mays PHT60 CAU498
SRS294455 Zea mays mays PHG83 CAU501
SRS294457 Zea mays mays PHJ75 CAU503
SRS294458 Zea mays mays PB80 CAU505
SRS294459 Zea mays mays LH52 CAU510
SRS294460 Zea mays mays PHW52 CAU513
SRS294461 Zea mays mays LH93 CAU514
SRS294462 Zea mays mays PHM57 CAU515
SRS294463 Zea mays mays LH60 CAU517
SRS294464 Zea mays mays PHG71 CAU518
SRS294465 Zea mays mays Q381 CAU520
SRS294466 Zea mays mays MBPM CAU521
SRS294467 Zea mays mays PHW03 CAU522
SRS294468 Zea mays mays PHW43 CAU523
SRS294469 Zea mays mays LH190 CAU525
SRS294473 Zea mays mays B47 CAU526
SRS294474 Zea mays mays PHV78 CAU527
SRS294475 Zea mays mays LH61 CAU528
SRS294476 Zea mays mays PHK76 CAU530
SRS294477 Zea mays mays LH1 CAU531
SRS294478 Zea mays mays PHG35 CAU532
SRS294479 Zea mays mays PHJ31 CAU534
SRS294480 Zea mays mays 78002A CAU535
SRS294481 Zea mays mays 792 CAU536
SRS294482 Zea mays mays PHJ40 CAU537
SRS294483 Zea mays mays LH54 CAU538
SRS294484 Zea mays mays FAPW CAU539
SRS294485 Zea mays mays LH205 CAU541
SRS294486 Zea mays mays LH127 CAU542
SRS294487 Zea mays mays LH194 CAU545
SRS294488 Zea mays mays LH202 CAU546
SRS294489 Zea mays mays LH191 CAU547
SRS294490 Zea mays mays LH192 CAU548
SRS294491 Zea mays mays RS710 CAU549
SRS294492 Zea mays mays PHW51 CAU551
SRS294493 Zea mays mays PHP85 CAU566
SRS294494 Zea mays mays LH143 CAU572
SRS294495 Zea mays mays 207 CAU574
SRS294496 Zea mays mays CR1HT CAU575
SRS294497 Zea mays mays 6103 CAU576
SRS294498 Zea mays mays IB014 CAU577
SRS294499 Zea mays mays 4676A CAU578
SRS294500 Zea mays mays B12 CAU58
SRS294501 Zea mays mays PHR36 CAU580
SRS294502 Zea mays mays NS701 CAU581
SRS294503 Zea mays mays IB02 CAU582
SRS294504 Zea mays mays IBB15 CAU583
SRS294505 Zea mays mays 787 CAU584
SRS294506 Zea mays mays 11430 CAU586
SRS294507 Zea mays mays 2369 CAU587
SRS294508 Zea mays mays 2MA22 CAU588
SRS294509 Zea mays mays 87916W CAU589
SRS294510 Zea mays mays MBST CAU590
SRS294511 Zea mays mays PHN47 CAU591
SRS294512 Zea mays mays NS501 CAU592
SRS294513 Zea mays mays H8431 CAU593
SRS294514 Zea mays mays S8324 CAU594
SRS294515 Zea mays mays CR14 CAU595
SRS294516 Zea mays mays WIL901 CAU596
SRS294517 Zea mays mays WIL903 CAU597
SRS294518 Zea mays mays WIL500 CAU598
SRS294519 Zea mays mays E8501 CAU599
SRS294520 Zea mays mays L135 CAU601
SRS294521 Zea mays mays PHM10 CAU604
SRS294522 Zea mays mays PHN82 CAU605
SRS294523 Zea mays mays PHP60 CAU606
SRS294524 Zea mays mays PHR63 CAU607
SRS294525 Zea mays mays PHV37 CAU609
SRS294526 Zea mays mays ji870 CAU61
SRS294527 Zea mays mays PHW20 CAU610
SRS294528 Zea mays mays W23 CAU611
SRS294529 Zea mays mays fu8521 CAU63
SRS294530 Zea mays mays PHP55 CAU631
SRS294531 Zea mays mays huobai CAU638
SRS294532 Zea mays mays jiao05 CAU68
SRS294533 Zea mays mays qi410 CAU69
SRS294534 Zea mays mays xiangai3 CAU73
SRS294535 Zea mays mays fusheA CAU74
SRS294536 Zea mays mays qiong51 CAU76
SRS294537 Zea mays mays DH149 CAU77
SRS294538 Zea mays mays R08 CAU78
SRS294539 Zea mays mays B95 CAU84
SRS294540 Zea mays mays guan17-1 CAU97
SRS294541 Zea mays mays wu125 CAU98
SRS302388 Zea mays mays B97
SRS302389 Zea mays mays BKN009
SRS302390 Zea mays mays BKN010
SRS302391 Zea mays mays BKN011
SRS302392 Zea mays mays BKN014
SRS302393 Zea mays mays BKN015
SRS302394 Zea mays mays BKN016
SRS302395 Zea mays mays BKN017
SRS302396 Zea mays mays BKN018
SRS302397 Zea mays mays BKN019
SRS302398 Zea mays mays BKN020
SRS302399 Zea mays mays BKN022
SRS302400 Zea mays mays BKN023
SRS302401 Zea mays mays BKN025
SRS302402 Zea mays mays BKN026
SRS302403 Zea mays mays BKN027
SRS302404 Zea mays mays BKN029
SRS302405 Zea mays mays BKN030
SRS302406 Zea mays mays BKN031
SRS302407 Zea mays mays BKN032
SRS302408 Zea mays mays BKN033
SRS302409 Zea mays mays BKN034
SRS302410 Zea mays mays BKN035
SRS302411 Zea mays mays BKN040
SRS302412 Zea mays mays changK CAU178
SRS302413 Zea mays mays CAU478
SRS302414 Zea mays mays CAU5003
SRS302415 Zea mays mays CAUCHANG72
SRS302416 Zea mays mays CAUMO17
SRS302417 Zea mays mays CAUZHENG58
SRS302418 Zea mays mays CML103
SRS302419 Zea mays mays CML133
SRS302420 Zea mays mays CML192
SRS302421 Zea mays mays CML202
SRS302422 Zea mays mays CML206
SRS302423 Zea mays mays CML228
SRS302424 Zea mays mays CML247
SRS302425 Zea mays mays CML277
SRS302426 Zea mays mays CML312SR
SRS302427 Zea mays mays CML322
SRS302428 Zea mays mays CML330
SRS302429 Zea mays mays CML333
SRS302430 Zea mays mays CML341
SRS302431 Zea mays mays CML411
SRS302432 Zea mays mays CML418
SRS302433 Zea mays mays CML479
SRS302434 Zea mays mays CML504
SRS302435 Zea mays mays CML505
SRS302436 Zea mays mays CML511
SRS302437 Zea mays mays CML52
SRS302438 Zea mays mays CML69
SRS302439 Zea mays mays CML84
SRS302440 Zea mays mays CML85
SRS302441 Zea mays mays CML96
SRS302442 Zea mays mays CML99
SRS302443 Zea mays mays H16
SRS302444 Zea mays mays HP301
SRS302445 Zea mays mays IL14H
SRS302447 Zea mays mays KI3
SRS302448 Zea mays mays KY21
SRS302449 Zea mays mays M162W
SRS302450 Zea mays mays M37W
SRS302452 Zea mays mays MO18W
SRS302453 Zea mays mays MS71
SRS302454 Zea mays mays NC350
SRS302455 Zea mays mays NC358
SRS302457 Zea mays mays OH7B
SRS302458 Zea mays mays P1
SRS302461 Zea mays parviglumis TIL01
SRS302462 Zea mays parviglumis TIL02
SRS302463 Zea mays parviglumis TIL03
SRS302464 Zea mays parviglumis TIL04-TIP285
SRS302465 Zea mays parviglumis TIL04-TIP454
SRS302466 Zea mays parviglumis TIL05
SRS302467 Zea mays parviglumis TIL06
SRS302468 Zea mays parviglumis TIL06-TIP496
SRS302469 Zea mays parviglumis TIL07
SRS302470 Zea mays mexicana TIL08
SRS302471 Zea mays parviglumis TIL09
SRS302472 Zea mays parviglumis TIL10
SRS302473 Zea mays parviglumis TIL11
SRS302474 Zea mays parviglumis TIL12
SRS302475 Zea mays parviglumis TIL14
SRS302476 Zea mays parviglumis TIL15
SRS302479 Zea mays mexicana TIL25
SRS302480 Zea mays mays TX303
SRS302482 Zea mays mays VL0512447
SRS302483 Zea mays mays VL05128
SRS302484 Zea mays mays VL054178
SRS302485 Zea mays mays VL05610
SRS302486 Zea mays mays VL056883
SRS302487 Zea mays mays VL062784
SRS302488 Zea mays mays W22
SRS302489 Zea mays mays W64A
SRS306612 Zea mays mays Mo17


SRA sample ID species subspecies strain ID
SRS190896 Sorghum bicolor bicolor Rio
SRS266351 Sorghum bicolor E-Tian
SRS266352 Sorghum bicolor Ji2731
SRS266353 Sorghum bicolor Keller
SRS308944 Sorghum bicolor bicolor ZM/A 5298 PI 505722
SRS309196 Sorghum bicolor bicolor MA 38 PI 508366
SRS309197 Sorghum bicolor Top76-6
SRS309422 Sorghum bicolor Grassl
SRS361463 Sorghum bicolor Tx378
SRS361608 Sorghum bicolor bicolor SC155
SRS361613 Sorghum bicolor bicolor SC265
SRS361618 Sorghum bicolor bicolor SC971
SRS361620 Sorghum bicolor Ajabsido
SRS361627 Sorghum bicolor IS3620c
SRS361632 Sorghum bicolor bicolor Tx631
SRS361645 Sorghum bicolor bicolor SC1103
SRS361646 Sorghum bicolor bicolor SC35
SRS361660 Sorghum bicolor bicolor Tx642
SRS378430 Sorghum bicolor bicolor Ai4
SRS378431 Sorghum bicolor bicolor B35
SRS378432 Sorghum bicolor bicolor B923296
SRS378433 Sorghum bicolor bicolor Greenleaf
SRS378434 Sorghum bicolor bicolor Early Hegari
SRS378435 Sorghum bicolor bicolor ICSV745
SRS378436 Sorghum bicolor bicolor IS3614-2
SRS378437 Sorghum bicolor bicolor IS8525
SRS378438 Sorghum bicolor bicolor IS9710
SRS378439 Sorghum bicolor bicolor Karper 669
SRS378440 Sorghum bicolor bicolor KS115
SRS378441 Sorghum bicolor bicolor LR9198
SRS378442 Sorghum bicolor bicolor M35-1
SRS378443 Sorghum bicolor bicolor Macia
SRS378444 Sorghum bicolor bicolor Malisor 84-7
SRS378445 Sorghum bicolor bicolor PI 525695
SRS378446 Sorghum bicolor bicolor QL12
SRS378447 Sorghum bicolor bicolor R931945-2-2
SRS378448 Sorghum bicolor bicolor Rio
SRS378449 Sorghum bicolor bicolor RTx7000
SRS378450 Sorghum bicolor drummondii PI 330272
SRS378451 Sorghum bicolor bicolor SC103-14E
SRS378457 Sorghum bicolor bicolor SC35C
SRS378458 Sorghum bicolor bicolor SC56-14E
SRS378459 Sorghum bicolor bicolor SC62C
SRS378460 Sorghum bicolor bicolor PI 586430
SRS378461 Sorghum bicolor bicolor B963676
SRS378462 Sorghum bicolor verticilliflorum PI 300119
SRS378463 Sorghum bicolor bicolor PI 226096
SRS378464 Sorghum bicolor bicolor PI 585749
SRS378465 Sorghum bicolor verticilliflorum AusTRCF 317961
SRS378466 Sorghum propinquum 369-1
SRS378467 Sorghum propinquum 369-2
SRS378468 Sorghum bicolor bicolor IBC/E-38432
SRS378469 Sorghum bicolor bicolor Yik.solate (IBC/E-339)
SRS378470 Sorghum bicolor bicolor Kilo (IBC/E-382)
SRS378471 Sorghum bicolor bicolor Cherekit (IBC/E-460)
SRS378472 Sorghum bicolor bicolor Zengada (IBC/E-308)
SRS378473 Sorghum bicolor bicolor PI 563516
SRS438583 Sorghum bicolor bicolor SC301
SRS438584 Sorghum bicolor bicolor B35
SRS438585 Sorghum bicolor bicolor Grassl
SRS438586 Sorghum bicolor bicolor IS25702
SRS438587 Sorghum bicolor bicolor SC52
SRS438588 Sorghum bicolor bicolor SC110
SRS438589 Sorghum bicolor bicolor SC650
SRS438590 Sorghum bicolor bicolor SC566
SRS438591 Sorghum bicolor bicolor SC55

Upload your variant call file. (optional)

Select the target organism.

Select a variant call format (VCF) file.

Upload file includes only homozygous SNPs data detected with GT fields in VCF.

File name (excluding extension) is the strain name.

A prohibited character: _ (underscore)

example) Koshihikari.vcf → Koshihikari

Sample upload file (Rice): Koshihikari.vcf

Set the analytical parameters. (optional)

Multiple Sequence Alignment using ClustalW2

clustalw2 -align -infile=fasta.fa -outfile=output.aln -newtree=guidetree.dnd
See also ClustalW2 help.



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